The primer analysis tool allows for easy visual and statistical analysis of primer sequences in T-cell receptor
repertoire NGS data (
*.fastq.gz). Primer and adapter sequences can be changed to match
the sequences used in library preparation. Multiple barcode sequences representing individuals can be added for
The sequence viewer tab highlights primer, adapter, and barcode sequences in reads for easy analysis. The whole input file can be browsed in pages of 500 reads (one read per line).
The statistics tab calculates frequencies of sequences and relevant sequence combinations. The results are displayed in a table aswell as a bar chart.